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Home / Industries / Ecommerce
Ecommerce

Accountants for ecommerce businesses

Running a Shopify, Amazon or WooCommerce store is a real business with real tax complexity. We keep your books clean, your VAT right and your numbers clear so you can scale.

VAT done right Clean cloud books Built to scale

Ecommerce brings volume, fees from multiple platforms, stock to track and VAT that can get complicated fast, especially as you grow or sell across borders. Messy figures make every decision harder.

We help ecommerce sellers keep tidy cloud books, get VAT right and understand their true margins, so the business is built on solid numbers rather than guesswork.

The tax challenges ecommerce businesses face

  • High transaction volume across several sales channels
  • Platform and payment fees eating into margins if not tracked
  • VAT registration, schemes and selling across borders
  • Tracking inventory and cost of goods accurately
  • Knowing your real profit, not just your turnover

What we help with

  • Cloud bookkeeping on Xero or QuickBooks
  • Sales and fees reconciled across channels
  • VAT returns and the right scheme for your store
  • Inventory and cost of goods kept accurate
  • Management figures so you know your margins
  • Year end accounts and company tax

Common mistakes to avoid

Judging the business on turnover instead of profit after fees and VAT
Leaving bookkeeping until year end when volume makes it a nightmare
Getting VAT wrong on cross border or marketplace sales
Not separating personal and business money from day one

Useful tax tips

  • Connect your store and bank to cloud software so most bookkeeping is automatic
  • Watch your margins after fees, postage and VAT, not just your sales
  • Review VAT early, as crossing the threshold changes your pricing
  • Keep stock records tidy so cost of goods is accurate
Example scenario

A Shopify store that finally knew its numbers

A growing Shopify seller felt busy but unsure if they were profitable. We set up clean cloud books, reconciled the fees from each channel and produced simple monthly figures. For the first time they could see their true margin and make pricing and stock decisions with confidence.

Frequently asked questions

Which software do you use for ecommerce?
We work with Xero and QuickBooks and connect them to your store and payment providers so most of the bookkeeping is automatic.
Do I need to be VAT registered?
Once your taxable turnover passes the threshold you must register, and there are points to consider sooner if you sell across borders. We review this with you.
Can you handle multiple sales channels?
Yes. We reconcile sales and fees across channels such as Shopify, Amazon and WooCommerce so your books are accurate.
Are you UK wide?
Yes. We work online with ecommerce businesses across the UK.

Specialist tax help for ecommerce businesses

Tell us about your situation and we will come back with a clear fixed fee, with no obligation.

The detail

Who this is for, and how we help ecommerce businesses

This page is for ecommerce businesses selling through their own shop or on marketplaces such as Amazon, Etsy and eBay. A frequent turning point is approaching the VAT registration threshold, because once taxable turnover passes £90,000 the rules change and many owners are unsure how that will affect their prices and margins. We keep your bookkeeping in order, watch your turnover against the threshold, and handle VAT registration and returns at the right moment so that nothing comes as a surprise.

What you will need

  • Sales reports from each channel, such as your own website, Amazon or Etsy
  • A record of your rolling 12 month turnover so the VAT threshold can be tracked
  • Cost of goods records, including stock purchases and import or shipping costs
  • Marketplace, payment processor and advertising fees
  • Packaging, postage and fulfilment costs
  • Bank and payment account statements for the business
  • Details of the business structure, whether sole trader or limited company
  • Records kept for at least 5 years, which we help you organise
Worked example

An online shop approaching the VAT threshold

Imagine an ecommerce shop in the 2026/27 year whose taxable turnover over the last 12 months reaches £88,000 and is rising by roughly £3,000 each month. Because the VAT registration threshold is £90,000, the business is about to cross it within weeks. We would register the shop for VAT from the correct date, after which it would charge VAT on its sales, for example £20 of VAT on a £100 product at the standard rate, and would also reclaim the VAT on its stock and costs. Planning this in advance lets the owner decide how to handle pricing rather than absorbing the change at short notice.

Get started

Tell us about your situation

We work with ecommerce right across the UK, fully online. Send a few details and we will come back with a clear fixed fee.

Fixed fee quote

Tell us a little about you

Pop in your details and we will come back with a clear fixed fee, usually within one working day. No obligation, and we never share your details.

No obligation. We usually reply within one working day.

Thank you, your details are on their way

We will be in touch shortly, usually within one working day, with the next steps and a clear fixed fee.

Go deeper

Related guides, tools and real results

Everything around ecommerce, in one place, all part of working with us.